My Bibliography

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Luckett R, Ramogola-Masire D, Gompers A, Moraka N, Moyo S, Sedabadi L, Tawe L, Kashamba T, Gaborone K, Mathoma A, Noubary F, Kula M, Grover S, Dreyer G, Botha MH, Makhema J, Shapiro R, Hacker MR. Triage of HPV positivity in a high HIV prevalence setting: A prospective cohort study comparing visual triage methods and HPV genotype restriction in Botswana. Int J Gynaecol Obstet. 2024 May;165(2):507-518. doi: 10.1002/ijgo.15225. Epub 2023 Nov 10. PubMed PMID: 37950533; PubMed Central PMCID: PMC11021160.

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Moyo S, Ramogola-Masire D, Moraka NO, Tawe L, Noubary F, Motsumi K, Manowe G, Zuze B, Radibe B, Hungwe FTT, Mohammed T, Maphorisa C, Shapiro R, Gaseitsiwe S, Luckett R. Comparison of the AmpFire® Multiplex HPV Assay to the Xpert® HPV Assay for detection of human papillomavirus and cervical disease in women with human immunodeficiency virus: a pragmatic performance evaluation. Infect Agent Cancer. 2023 May 10;18(1):29. doi: 10.1186/s13027-023-00504-z. PubMed PMID: 37165397; PubMed Central PMCID: PMC10170707.

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Schwamm E, Noubary F, Rigotti NA, Reddy KP. Longitudinal transitions in initiation, cessation, and relapse of cigarette smoking and e-cigarette use among US youth and adults: Validation of a microsimulation model. PLoS One. 2023;18(4):e0284426. doi: 10.1371/journal.pone.0284426. eCollection 2023. PubMed PMID: 37058462; PubMed Central PMCID: PMC10104340.

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Moyo S, Ramogola-Masire D, Moraka N, Tawe L, Noubary F, Motsumi K, Manowe G, Zuze B, Radibe B, Hungwe FT, Mohammed T, Maphorisa C, Shapiro R, Gaseitsiwe S, Luckett R. Comparison of the AmpFire Multiplex HPV Assay to the Xpert HPV Assay for detection of human papillomavirus and cervical disease in women with human immunodeficiency virus: A pragmatic performance evaluation. Res Sq. 2023 Mar 2;. doi: 10.21203/rs.3.rs-2606441/v1. PubMed PMID: 36909533; PubMed Central PMCID: PMC10002806.

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Ryner RF, Derera ID, Armbruster M, Kansara A, Sommer ME, Pirone A, Noubary F, Jacob M, Dulla CG. Cortical Parvalbumin-Positive Interneuron Development and Function Are Altered in the APC Conditional Knockout Mouse Model of Infantile and Epileptic Spasms Syndrome. J Neurosci. 2023 Feb 22;43(8):1422-1440. doi: 10.1523/JNEUROSCI.0572-22.2022. Epub 2023 Jan 30. PubMed PMID: 36717229; PubMed Central PMCID: PMC9987578.

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Gero K, Noubary F, Kawachi I, Baum CF, Wallace RB, Briesacher BA, Kim D. Associations of state-level and county-level hate crimes with individual-level cardiovascular risk factors in a prospective cohort study of middle-aged Americans: the National Longitudinal Survey of Youths 1979. BMJ Open. 2022 Jan 19;12(1):e054360. doi: 10.1136/bmjopen-2021-054360. PubMed PMID: 35046003; PubMed Central PMCID: PMC8772402.

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Reddy KP, Schwamm E, Kalkhoran S, Noubary F, Walensky RP, Rigotti NA. Respiratory Symptom Incidence among People Using Electronic Cigarettes, Combustible Tobacco, or Both. Am J Respir Crit Care Med. 2021 Jul 15;204(2):231-234. doi: 10.1164/rccm.202012-4441LE. PubMed PMID: 33857396; PubMed Central PMCID: PMC8650793.

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Alon D, Sousa CV, Baranowski T, Barreira TV, Cabrera-Perez R, Chiu K, Fernandez A, Fleischman A, Huang S, Hwang J, Green MC, Lee IM, Lee K, Lessard S, Levitsky LL, Misawa A, Noubary F, Samuels R, Sun KJ, Thompson D, Lu AS. The impact of narratives and active video games on long-term moderate-to-vigorous physical activity: A randomized controlled trial protocol. Contemp Clin Trials. 2020 Sep;96:106087. doi: 10.1016/j.cct.2020.106087. Epub 2020 Jul 17. PubMed PMID: 32682995; PubMed Central PMCID: PMC7494553.

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Welch LC, Tomoaia-Cotisel A, Noubary F, Chang H, Mendel P, Parajulee A, Fenwood-Hughes M, Etchegaray JM, Qureshi N, Chandler R, Selker HP. Evaluation of initial progress to implement Common Metrics across the NIH Clinical and Translational Science Awards (CTSA) Consortium. J Clin Transl Sci. 2020 Jul 28;5(1):e25. doi: 10.1017/cts.2020.517. PubMed PMID: 33948248; PubMed Central PMCID: PMC8057371.

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Dong J, Esham KS, Boehm L, Karim SA, Lin M, Mao D, Wang F, Fein D, Wang H, Studenmund C, Weidner RA, Noubary F, Freund KM, Erban JK, Parsons SK. Timeliness of Treatment Initiation in Newly Diagnosed Patients With Breast Cancer. Clin Breast Cancer. 2020 Feb;20(1):e27-e35. doi: 10.1016/j.clbc.2019.06.009. Epub 2019 Jul 11. PubMed PMID: 31439436; NIHMSID:NIHMS1853903.

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Daudelin DH, Peterson LE, Welch LC, Chandler R, Pandey M, Noubary F, Lee PL, Selker HP. Implementing Common Metrics across the NIH Clinical and Translational Science Awards (CTSA) consortium. J Clin Transl Sci. 2020 Feb;4(1):16-21. doi: 10.1017/cts.2019.425. eCollection 2020 Feb. PubMed PMID: 32257406; PubMed Central PMCID: PMC7103469.

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Esham KS, Rodday AM, Smith HP, Noubary F, Weidner RA, Buchsbaum RJ, Parsons SK. Assessment of health-related quality of life among adults hospitalized with sickle cell disease vaso-occlusive crisis. Blood Adv. 2020 Jan 14;4(1):19-27. doi: 10.1182/bloodadvances.2019000128. PubMed PMID: 31891655; PubMed Central PMCID: PMC6960476.

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Hanson E, Armbruster M, Lau LA, Sommer ME, Klaft ZJ, Swanger SA, Traynelis SF, Moss SJ, Noubary F, Chadchankar J, Dulla CG. Tonic Activation of GluN2C/GluN2D-Containing NMDA Receptors by Ambient Glutamate Facilitates Cortical Interneuron Maturation. J Neurosci. 2019 May 8;39(19):3611-3626. doi: 10.1523/JNEUROSCI.1392-18.2019. Epub 2019 Mar 7. PubMed PMID: 30846615; PubMed Central PMCID: PMC6510335.

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Koenig JB, Cantu D, Low C, Sommer M, Noubary F, Croker D, Whalen M, Kong D, Dulla CG. Glycolytic inhibitor 2-deoxyglucose prevents cortical hyperexcitability after traumatic brain injury. JCI Insight. 2019 Apr 30;5(11). doi: 10.1172/jci.insight.126506. PubMed PMID: 31038473; PubMed Central PMCID: PMC6629107.

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Melnitchouk N, Soeteman DI, Davids JS, Fields A, Cohen J, Noubary F, Lukashenko A, Kolesnik OO, Freund KM. Cost-effectiveness of colorectal cancer screening in Ukraine. Cost Eff Resour Alloc. 2018;16:20. doi: 10.1186/s12962-018-0104-0. eCollection 2018. PubMed PMID: 29977160; PubMed Central PMCID: PMC5992826.

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Mirhashemi ME, Noubary F, Chapman-Bonofiglio S, Tzipori S, Huggins GS, Widmer G. Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages. Parasit Vectors. 2018 Mar 12;11(1):176. doi: 10.1186/s13071-018-2754-3. PubMed PMID: 29530089; PubMed Central PMCID: PMC5848449.

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Lau LA, Noubary F, Wang D, Dulla CG. α2δ-1 Signaling Drives Cell Death, Synaptogenesis, Circuit Reorganization, and Gabapentin-Mediated Neuroprotection in a Model of Insult-Induced Cortical Malformation. eNeuro. 2017 Sep-Oct;4(5). doi: 10.1523/ENEURO.0316-17.2017. eCollection 2017 Sep-Oct. PubMed PMID: 29109971; PubMed Central PMCID: PMC5672548.

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Babyak JM, Weiner DE, Noubary F, Sharp CR. Prevalence of Elevated Serum Creatinine Concentration in Dogs Presenting to a Veterinary Academic Medical Center (2010-2014). J Vet Intern Med. 2017 Nov;31(6):1757-1764. doi: 10.1111/jvim.14823. Epub 2017 Sep 11. PubMed PMID: 28891088; PubMed Central PMCID: PMC5697188.

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Jin H, Welzig CM, Aronovitz M, Noubary F, Blanton R, Wang B, Rajab M, Albano A, Link MS, Noujaim SF, Park HJ, Galper JB. QRS/T-wave and calcium alternans in a type I diabetic mouse model for spontaneous postmyocardial infarction ventricular tachycardia: A mechanism for the antiarrhythmic effect of statins. Heart Rhythm. 2017 Sep;14(9):1406-1416. doi: 10.1016/j.hrthm.2017.05.026. Epub 2017 May 15. PubMed PMID: 28522367; PubMed Central PMCID: PMC5713915.

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Vani K, Sompuram SR, Schaedle AK, Balasubramanian A, Pilichowska M, Naber S, Goldsmith JD, Chang KG, Noubary F, Bogen SA. The Importance of Epitope Density in Selecting a Sensitive Positive IHC Control. J Histochem Cytochem. 2017 Aug;65(8):463-477. doi: 10.1369/0022155417714208. Epub 2017 Jun 30. PubMed PMID: 28665229; PubMed Central PMCID: PMC5533270.

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Levac D, Glegg S, Colquhoun H, Miller P, Noubary F. Virtual Reality and Active Videogame-Based Practice, Learning Needs, and Preferences: A Cross-Canada Survey of Physical Therapists and Occupational Therapists. Games Health J. 2017 Aug;6(4):217-228. doi: 10.1089/g4h.2016.0089. PubMed PMID: 28816511.

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Linder DE, Sacheck JM, Noubary F, Nelson ME, Freeman LM. Dog attachment and perceived social support in overweight/obese and healthy weight children. Prev Med Rep. 2017 Jun;6:352-354. doi: 10.1016/j.pmedr.2017.04.014. eCollection 2017 Jun. PubMed PMID: 28491488; PubMed Central PMCID: PMC5423301.

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Amro OW, Paulus JK, Noubary F, Perrone RD. Low-Osmolar Diet and Adjusted Water Intake for Vasopressin Reduction in Autosomal Dominant Polycystic Kidney Disease: A Pilot Randomized Controlled Trial. Am J Kidney Dis. 2016 Dec;68(6):882-891. doi: 10.1053/j.ajkd.2016.07.023. Epub 2016 Sep 20. PubMed PMID: 27663039; PubMed Central PMCID: PMC5123924.

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Upshaw JN, Konstam MA, Klaveren Dv, Noubary F, Huggins GS, Kent DM. Multistate Model to Predict Heart Failure Hospitalizations and All-Cause Mortality in Outpatients With Heart Failure With Reduced Ejection Fraction: Model Derivation and External Validation. Circ Heart Fail. 2016 Aug;9(8). doi: 10.1161/CIRCHEARTFAILURE.116.003146. PubMed PMID: 27514751; PubMed Central PMCID: PMC5328587.

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Inker LA, Okparavero A, Tighiouart H, Aspelund T, Andresdottir MB, Eiriksdottir G, Harris T, Launer L, Nikulasdottir H, Sverrisdottir JE, Gudmundsdottir H, Noubary F, Mitchell G, Palsson R, Indridason OS, Gudnason V, Levey AS. Midlife Blood Pressure and Late-Life GFR and Albuminuria: An Elderly General Population Cohort. Am J Kidney Dis. 2015 Aug;66(2):240-8. doi: 10.1053/j.ajkd.2015.03.030. Epub 2015 May 16. PubMed PMID: 25987258; PubMed Central PMCID: PMC4516633.

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Michener KH, Mitchell GF, Noubary F, Huang N, Harris T, Andresdottir MB, Palsson R, Gudnason V, Levey AS. Aortic stiffness and kidney disease in an elderly population. Am J Nephrol. 2015;41(4-5):320-8. doi: 10.1159/000431332. Epub 2015 Jun 6. PubMed PMID: 26067356; PubMed Central PMCID: PMC4514536.

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Thuppal SV, Wanke CA, Noubary F, Cohen JT, Mwamburi M, Ooriapdickal AC, Muliyil J, Kang G, Varghese GM, Rupali P, Karthik R, Sathasivam R, Clarance P, Pulimood SA, Peter D, George L. Toxicity and clinical outcomes in patients with HIV on zidovudine and tenofovir based regimens: a retrospective cohort study. Trans R Soc Trop Med Hyg. 2015 Jun;109(6):379-85. doi: 10.1093/trstmh/trv016. Epub 2015 Mar 15. PubMed PMID: 25778734; PubMed Central PMCID: PMC4542851.

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Jain S, Rajasingham R, Noubary F, Coonahan E, Schoeplein R, Baden R, Curry M, Afdhal N, Kumar S, Pollock NR. Performance of an Optimized Paper-Based Test for Rapid Visual Measurement of Alanine Aminotransferase (ALT) in Fingerstick and Venipuncture Samples. PLoS One. 2015;10(5):e0128118. doi: 10.1371/journal.pone.0128118. eCollection 2015. PubMed PMID: 26020244; PubMed Central PMCID: PMC4447376.

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Inker LA, Lambers Heerspink HJ, Mondal H, Schmid CH, Tighiouart H, Noubary F, Coresh J, Greene T, Levey AS. GFR decline as an alternative end point to kidney failure in clinical trials: a meta-analysis of treatment effects from 37 randomized trials. Am J Kidney Dis. 2014 Dec;64(6):848-59. doi: 10.1053/j.ajkd.2014.08.017. Epub 2014 Oct 16. PubMed PMID: 25441438.

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Cohen GM, Drain PK, Noubary F, Cloete C, Bassett IV. Diagnostic delays and clinical decision making with centralized Xpert MTB/RIF testing in Durban, South Africa. J Acquir Immune Defic Syndr. 2014 Nov 1;67(3):e88-93. doi: 10.1097/QAI.0000000000000309. PubMed PMID: 25314255; PubMed Central PMCID: PMC4197409.

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Traa MX, Barboza L, Doron S, Snydman DR, Noubary F, Nasraway SA Jr. Horizontal infection control strategy decreases methicillin-resistant Staphylococcus aureus infection and eliminates bacteremia in a surgical ICU without active surveillance. Crit Care Med. 2014 Oct;42(10):2151-7. doi: 10.1097/CCM.0000000000000501. PubMed PMID: 24979485.

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Tickle-Degnen L, Saint-Hilaire M, Thomas CA, Habermann B, Martinez LS, Terrin N, Noubary F, Naumova EN. Emergence and evolution of social self-management of Parkinson's disease: study protocol for a 3-year prospective cohort study. BMC Neurol. 2014 May 2;14:95. doi: 10.1186/1471-2377-14-95. PubMed PMID: 24885181; PubMed Central PMCID: PMC4016672.

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Shenoy ES, Noubary F, Kim J, Rosenberg ES, Cotter JA, Lee H, Walensky RP, Hooper DC. Concordance of PCR and culture from nasal swabs for detection of methicillin-resistant Staphylococcus aureus in a setting of concurrent antistaphylococcal antibiotics. J Clin Microbiol. 2014 Apr;52(4):1235-7. doi: 10.1128/JCM.02972-13. Epub 2014 Jan 22. PubMed PMID: 24452168; PubMed Central PMCID: PMC3993487.

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Shenoy ES, Paras ML, Noubary F, Walensky RP, Hooper DC. Natural history of colonization with methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus (VRE): a systematic review. BMC Infect Dis. 2014 Mar 31;14:177. doi: 10.1186/1471-2334-14-177. Review. PubMed PMID: 24678646; PubMed Central PMCID: PMC4230428.

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Drain PK, Hyle EP, Noubary F, Freedberg KA, Wilson D, Bishai WR, Rodriguez W, Bassett IV. Diagnostic point-of-care tests in resource-limited settings. Lancet Infect Dis. 2014 Mar;14(3):239-49. doi: 10.1016/S1473-3099(13)70250-0. Epub 2013 Dec 10. Review. PubMed PMID: 24332389; PubMed Central PMCID: PMC4016042.

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Bassett IV, Govindasamy D, Erlwanger AS, Hyle EP, Kranzer K, van Schaik N, Noubary F, Paltiel AD, Wood R, Walensky RP, Losina E, Bekker LG, Freedberg KA. Mobile HIV screening in Cape Town, South Africa: clinical impact, cost and cost-effectiveness. PLoS One. 2014;9(1):e85197. doi: 10.1371/journal.pone.0085197. eCollection 2014. PubMed PMID: 24465503; PubMed Central PMCID: PMC3898963.

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Yazdanpanah Y, Perelman J, DiLorenzo MA, Alves J, Barros H, Mateus C, Pereira J, Mansinho K, Robine M, Park JE, Ross EL, Losina E, Walensky RP, Noubary F, Freedberg KA, Paltiel AD. Routine HIV screening in Portugal: clinical impact and cost-effectiveness. PLoS One. 2013;8(12):e84173. doi: 10.1371/journal.pone.0084173. eCollection 2013. PubMed PMID: 24367639; PubMed Central PMCID: PMC3867470.

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Ciaranello AL, Morris BL, Walensky RP, Weinstein MC, Ayaya S, Doherty K, Leroy V, Hou T, Desmonde S, Lu Z, Noubary F, Patel K, Ramirez-Avila L, Losina E, Seage GR 3rd, Freedberg KA. Validation and calibration of a computer simulation model of pediatric HIV infection. PLoS One. 2013;8(12):e83389. doi: 10.1371/journal.pone.0083389. eCollection 2013. PubMed PMID: 24349503; PubMed Central PMCID: PMC3862684.

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Ramirez-Avila L, Noubary F, Pansegrouw D, Sithole S, Giddy J, Losina E, Walensky RP, Bassett IV. The acceptability and feasibility of routine pediatric HIV testing in an outpatient clinic in Durban, South Africa. Pediatr Infect Dis J. 2013 Dec;32(12):1348-53. doi: 10.1097/INF.0b013e31829ba34b. PubMed PMID: 23694834; PubMed Central PMCID: PMC3895104.

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Govindasamy D, Kranzer K, van Schaik N, Noubary F, Wood R, Walensky RP, Freedberg KA, Bassett IV, Bekker LG. Linkage to HIV, TB and non-communicable disease care from a mobile testing unit in Cape Town, South Africa. PLoS One. 2013;8(11):e80017. doi: 10.1371/journal.pone.0080017. eCollection 2013. PubMed PMID: 24236170; PubMed Central PMCID: PMC3827432.

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Walensky RP, Ross EL, Kumarasamy N, Wood R, Noubary F, Paltiel AD, Nakamura YM, Godbole SV, Panchia R, Sanne I, Weinstein MC, Losina E, Mayer KH, Chen YQ, Wang L, McCauley M, Gamble T, Seage GR 3rd, Cohen MS, Freedberg KA. Cost-effectiveness of HIV treatment as prevention in serodiscordant couples. N Engl J Med. 2013 Oct 31;369(18):1715-25. doi: 10.1056/NEJMsa1214720. PubMed PMID: 24171517; PubMed Central PMCID: PMC3913536.

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Pollock NR, McGray S, Colby DJ, Noubary F, Nguyen H, Nguyen TA, Khormaee S, Jain S, Hawkins K, Kumar S, Rolland JP, Beattie PD, Chau NV, Quang VM, Barfield C, Tietje K, Steele M, Weigl BH. Field evaluation of a prototype paper-based point-of-care fingerstick transaminase test. PLoS One. 2013;8(9):e75616. doi: 10.1371/journal.pone.0075616. eCollection 2013. PubMed PMID: 24098705; PubMed Central PMCID: PMC3787037.

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Hyle EP, Wood BR, Backman ES, Noubary F, Hwang J, Lu Z, Losina E, Walensky RP, Gandhi RT. High frequency of hypothalamic-pituitary-adrenal axis dysfunction after local corticosteroid injection in HIV-infected patients on protease inhibitor therapy. J Acquir Immune Defic Syndr. 2013 Aug 15;63(5):602-8. doi: 10.1097/QAI.0b013e31829b662b. PubMed PMID: 23714741; PubMed Central PMCID: PMC3805773.

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Shenoy ES, Hsu H, Noubary F, Hooper DC, Walensky RP. National survey of infection preventionists: policies for discontinuation of contact precautions for methicillin-resistant Staphylococcus aureus and vancomycin-resistant enterococcus. Infect Control Hosp Epidemiol. 2012 Dec;33(12):1272-5. doi: 10.1086/668427. Epub 2012 Oct 26. PubMed PMID: 23143372; PubMed Central PMCID: PMC3496276.

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Noubary F, Hughes MD. Factors affecting timing of antiretroviral treatment initiation based on monitoring CD4 counts. J Acquir Immune Defic Syndr. 2012 Nov 1;61(3):326-33. doi: 10.1097/QAI.0b013e31826be75e. PubMed PMID: 22878419; PubMed Central PMCID: PMC3649850.

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Ramirez-Avila L, Nixon K, Noubary F, Giddy J, Losina E, Walensky RP, Bassett IV. Routine HIV testing in adolescents and young adults presenting to an outpatient clinic in Durban, South Africa. PLoS One. 2012;7(9):e45507. doi: 10.1371/journal.pone.0045507. Epub 2012 Sep 20. PubMed PMID: 23029060; PubMed Central PMCID: PMC3447803.

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Pollock NR, Rolland JP, Kumar S, Beattie PD, Jain S, Noubary F, Wong VL, Pohlmann RA, Ryan US, Whitesides GM. A paper-based multiplexed transaminase test for low-cost, point-of-care liver function testing. Sci Transl Med. 2012 Sep 19;4(152):152ra129. doi: 10.1126/scitranslmed.3003981. PubMed PMID: 22993296; PubMed Central PMCID: PMC3624093.

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Andrews JR, Lawn SD, Rusu C, Wood R, Noubary F, Bender MA, Horsburgh CR, Losina E, Freedberg KA, Walensky RP. The cost-effectiveness of routine tuberculosis screening with Xpert MTB/RIF prior to initiation of antiretroviral therapy: a model-based analysis. AIDS. 2012 May 15;26(8):987-95. doi: 10.1097/QAD.0b013e3283522d47. PubMed PMID: 22333751; PubMed Central PMCID: PMC3517815.

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Ahonkhai AA, Noubary F, Munro A, Stark R, Wilke M, Freedberg KA, Wood R, Losina E. Not all are lost: interrupted laboratory monitoring, early death, and loss to follow-up (LTFU) in a large South African treatment program. PLoS One. 2012;7(3):e32993. doi: 10.1371/journal.pone.0032993. Epub 2012 Mar 12. PubMed PMID: 22427925; PubMed Central PMCID: PMC3299719.

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Andrews JR, Noubary F, Walensky RP, Cerda R, Losina E, Horsburgh CR. Risk of progression to active tuberculosis following reinfection with Mycobacterium tuberculosis. Clin Infect Dis. 2012 Mar;54(6):784-91. doi: 10.1093/cid/cir951. Epub 2012 Jan 19. Review. PubMed PMID: 22267721; PubMed Central PMCID: PMC3284215.